Hori, Yutaka

写真a

Affiliation

Faculty of Science and Technology, Department of Applied Physics and Physico-Informatics (Yagami)

Position

Associate Professor

Related Websites
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Career 【 Display / hide 】

  • 2013.04
    -
    2013.08

    東京大学大学院, 情報理工学系研究科 システム情報学専攻, 特任研究員

  • 2013.09
    -
    2016.03

    California Institute of Technology, Department of Computing and Mathematical Sciences, Postdoctoral Scholar

  • 2017.04
    -
    2019.03

    Institute of Physical and Chemical Research, 統合生命医科学研究センター統合ゲノミクス研究グループ, 客員研究員

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Academic Background 【 Display / hide 】

  • 2008.03

    The University of Tokyo, 工学部, 計数工学科

    University, Graduated

  • 2010.03

    The University of Tokyo, 情報理工学系研究科, システム情報学専攻

    Graduate School, Completed, Master's course

  • 2013.03

    The University of Tokyo, 情報理工学系研究科, システム情報学専攻

    Graduate School, Completed

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Academic Degrees 【 Display / hide 】

  • 学士(工学), The University of Tokyo, 2008.03

  • 修士(情報理工学), The University of Tokyo, 2010.03

  • 博士 (情報理工学), The University of Tokyo, 2013.03

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Research Areas 【 Display / hide 】

  • Manufacturing Technology (Mechanical Engineering, Electrical and Electronic Engineering, Chemical Engineering) / Control and system engineering

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Research Keywords 【 Display / hide 】

  • molecular systems

  • molecular robotics

  • 制御工学

  • 制御理論

  • 合成生物学

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Papers 【 Display / hide 】

  • Evaluation of the microenvironment formed by interferon-β

    Mai Yamagishi, Yutaka Hori, Nobutake Suzuki, Yu Peng, Yoshie Harada, Takashi Funatsu, Osamu Ohara, Yoshitaka Shirasaki

    Frontiers in Chemical Biology 3   1425571 2025.01

    Research paper (scientific journal), Joint Work, Accepted

  • Parameter Invariance Analysis of Moment Equations Using Dulmage-Mendelsohn Decomposition

    Akito Igarashi, Yutaka Hori

    IEEE Control Systems Letters    accepted 2025

    Research paper (scientific journal), Joint Work, Accepted

  • Orthogonal Modal Representation in Long-Term Risk Quantification for Dynamic Multi-Agent Systems

    Ryoma Yasunaga, Yorie Nakahira, Yutaka Hori

    IEEE Control Systems Letters 8   3177 - 3182 2024.12

    Joint Work, Accepted

    　View Summary

    Quantifying long-term risk in large-scale multi-agent systems is critical for ensuring safe operation. However, the high dimensionality of these systems and the rarity of risk events can make the required computations prohibitively expensive. To overcome this challenge, we introduce a graph-based representation and efficient risk quantification techniques tailored for stochastic multi-agent systems. A key technical innovation is a systematic approach to decompose the estimation problem of system-wide safety probabilities into smaller, lower-dimensional sub-systems with sub-safe sets. This decomposition leverages the graph Fourier basis of the agent interaction network, providing a natural and scalable representation. The safety probabilities for these sub-systems are derived as solutions to a set of low-dimensional partial differential equations (PDEs). The proposed decomposition enables existing risk quantification approaches but does so without an exponential increase in computational complexity with respect to the number of agents.

  • Parameter-preserving model order reduction of chemical master equations with a priori error bound

    Masaya Miyazaki, Yutaka Hori

    Proceedings of Asian Control Conference    879 - 884 2024.07

    Research paper (international conference proceedings), Joint Work, Accepted

  • Stability analysis for large-scale multi-agent molecular communication systems

    Stability analysis for large-scale multi-agent molecular communication systems

    IEEE Transactions on NanoBioscience 23 ( 3 ) 507 - 517 2024.05

    Research paper (scientific journal), Joint Work, Accepted

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Papers, etc., Registered in KOARA 【 Display / hide 】

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Reviews, Commentaries, etc. 【 Display / hide 】

  • 生体分子を材料とする人工システムの設計と制御 〜生物と人工物をつなぐためのフレームワーク〜

    堀 豊

    計測と制御 60 ( 7 )  2021.07

    Article, review, commentary, editorial, etc. (scientific journal), Single Work

  • 確率ゆらぎを利用した生体分子システムの設計

    堀 豊

    計測と制御 60 ( 5 ) 345 - 350 2021.05

    Article, review, commentary, editorial, etc. (scientific journal), Single Work

  • Modeling and Analysis of Stochastic Reaction Kinetics in Biomolecular Systems

    Yutaka Hori

    New Generation Computing 38 ( 1 )  2020.05

    Article, review, commentary, editorial, etc. (scientific journal), Single Work

  • Control and Biology: Going Beyond the Boundary, and Fusing

    Yutaka Hori

    計測と制御 58 ( 5 ) 323 - 324 2019.05

    Other, Single Work

  • Modeling and Analysis of Stochastic Fluctuations in Biomolecular Systems

    Yutaka Hori

    計測と制御 58 ( 4 ) 253 - 257 2019.04

    Article, review, commentary, editorial, etc. (scientific journal), Single Work

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Presentations 【 Display / hide 】

  • Learning and Optimizing Dynamic DNA Circuits through Control-Inspired Microfluidic Platforms

    Yutaka Hori

    International Symposium on Molecular Cybernetics, 

    2025.06
    , 

    Oral presentation (invited, special)

  • 拡散長スケールの短縮によるリング型流路でのに溶液の混合時間短縮

    浅田琴紀，白石駿，宮廻裕樹，堀豊

    化学とマイクロ・ナノシステム学会第51回研究会, 

    2025.05
    , 

    Poster presentation

  • 確率ジャンプモデルに基づく生化学反応モーメント方程式のクロージャー法

    岩崎剛之，堀豊

    第12回計測自動制御学会制御部門マルチシンポジウム, 

    2025.03
    , 

    Oral presentation (general)

  • 平衡反応に基づくDNA回路のモジュール性向上

    李星達，川又生吹，宮廻裕樹，堀豊

    第8回分子ロボティクス年次大会, 

    2025.03
    , 

    Poster presentation

  • DNA spongeによる定常特性に影響しない遺伝子発現の過渡応答制御

    横田光輝，名村榛乃，堀豊

    第12回計測自動制御学会制御部門マルチシンポジウム, 

    2025.03
    , 

    Poster presentation

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Research Projects of Competitive Funds, etc. 【 Display / hide 】

  • サイバーDNA回路システムの最適制御理論とオープンな実験プラットフォーム

    2025.03
    -
    2027.03

    文部科学省・日本学術振興会, 国際共同研究加速基金(国際共同研究強化), Principal investigator

  • ロバストな分子情報処理を実現するDNA回路のフィードバック制御システムの構築

    2024.04
    -
    2028.03

    基盤研究(B), Principal investigator

  • 反応拡散系として分子的に実装されるニューラルネットワークシステムの開発

    2023.04
    -
    2026.03

    文部科学省・日本学術振興会, 科学研究費助成事業 基盤研究(A), Coinvestigator(s)

  • 再帰性と可塑性を有する分子学習モジュールのシステム設計理論

    2021.09
    -
    2023.03

    MEXT,JSPS, Grant-in-Aid for Scientific Research, 学術変革領域研究(A), Principal investigator

  • Distribution-based design of stochastic response in biomolecular systems

    2021.04
    -
    2025.03

    MEXT,JSPS, Grant-in-Aid for Scientific Research, Grant-in-Aid for Scientific Research (B), Principal investigator

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Intellectual Property Rights, etc. 【 Display / hide 】

  • 線形予測係数算出装置、線形予測係数算出方法、線形予測係数算出プログラム、および記憶媒体

    Date applied： 2008-051149  2008.02 

    Date announced： 2009-210644  2009.09 

    Date issued： 5057334  2012.08

    Patent, Joint

  • 符号化装置、復号化装置、符号化方法、復号化方法、プログラム、記録媒体

    Date applied： 2008-051150  2008.02 

    Date announced： 2009-210645  2009.09 

    Date issued： 5010293  2012.06

    Patent, Joint

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Courses Taught 【 Display / hide 】

  • PRESENTATION TECHNIQUE

    2025

  • INDEPENDENT STUDY ON FUNDAMENTAL SCIENCE AND TECHNOLOGY

    2025

  • GRADUATE RESEARCH ON FUNDAMENTAL SCIENCE AND TECHNOLOGY 2

    2025

  • GRADUATE RESEARCH ON FUNDAMENTAL SCIENCE AND TECHNOLOGY 1

    2025

  • BACHELOR'S THESIS

    2025

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Memberships in Academic Societies 【 Display / hide 】

  • IEEE

    　

  • 計測自動制御学会

    　

  • システム制御情報学会

    　
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Committee Experiences 【 Display / hide 】

  • 2025.04
    -
    Present

    代議員, 分子ロボティクス研究会

  • 2025.01
    -
    Present

    Associate Editor, IEEE Control Systems Letters

  • 2024.04
    -
    2026.03

    Secretary, IEEE Control Systems Society Japan Chapter

  • 2023
    -
    Present

    Associate Editor, IEEE Transactions on Molecular, Biological and Multi-Scale Communications

  • 2022.04
    -
    2024.03

    Treasurer, IEEE Control Systems Society, Japan Chapter

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