Papers - Oba, Junna
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Medical AI and AI for Medical Sciences.
Sakurada K, Ishikawa T, Oba J, Kuno M, Okano Y, Sakamaki T, Tamura T
JMA journal 8 ( 1 ) 26 - 37 2025.01
Research paper (scientific journal), Joint Work, ISSN 2433-328X
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J Oba, M Toriya, Y Uwamino, K Matsuo
Risk Management and Healthcare Policy, 649-662 17 649 - 662 2024
Research paper (scientific journal), Joint Work, Lead author, Accepted, ISSN 1179-1594
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Multi-modal molecular programs regulate melanoma cell state
Andrews M.C., Oba J., Wu C.J., Zhu H., Karpinets T., Creasy C.A., Forget M.A., Yu X., Song X., Mao X., Robertson A.G., Romano G., Li P., Burton E.M., Lu Y., Sloane R.S., Wani K.M., Rai K., Lazar A.J., Haydu L.E., Bustos M.A., Shen J., Chen Y., Morgan M.B., Wargo J.A., Kwong L.N., Haymaker C.L., Grimm E.A., Hwu P., Hoon D.S.B., Zhang J., Gershenwald J.E., Davies M.A., Futreal P.A., Bernatchez C., Woodman S.E.
Nature Communications (Nature Communications) 13 ( 1 ) 4000 2022.07
Research paper (scientific journal), Joint Work, Lead author, Accepted
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Oba J., Taniguchi H., Sato M., Takanashi M., Yokemura M., Sato Y., Nishihara H.
PLoS ONE (PLoS ONE) 17 ( 5 May ) e0263700 2022.05
Research paper (scientific journal), Joint Work, Lead author, Accepted
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CJ Terranova, M Tang, M Maitituoheti, AT Raman, AK Ghosh, J Schulz, ...
Cell reports 36 (3) (Cell Reports) 36 ( 3 ) 109410 2021.07
Research paper (scientific journal), Joint Work, Accepted, ISSN 2211-1247
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The genetic and epigenetic basis of distinct melanoma types
Oba J., Woodman S.E.
Journal of Dermatology (Journal of Dermatology) 48 ( 7 ) 925 - 939 2021.07
Research paper (scientific journal), Joint Work, Lead author, Accepted, ISSN 03852407
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Oba J., Taniguchi H., Sato M., Takamatsu R., Morikawa S., Nakagawa T., Takaishi H., Saya H., Matsuo K., Nishihara H.
Keio Journal of Medicine (Keio Journal of Medicine) 70 ( 2 ) 35 - 43 2021.06
Research paper (scientific journal), Joint Work, Lead author, Accepted, ISSN 00229717
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Elevated endogenous SDHA drives pathological metabolism in highly metastatic uveal melanoma
Chattopadhyay C., Oba J., Roszik J., Marszalek J.R., Chen K., Qi Y., Eterovic K., Gordon Robertson A., Burks J.K., McCannel T.A., Grimm E.A., Woodman S.E.
Investigative Ophthalmology and Visual Science (Investigative Ophthalmology and Visual Science) 60 ( 13 ) 4187 - 4195 2019.10
Research paper (scientific journal), Joint Work, Accepted, ISSN 01460404
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McKean M., Oba J., Ma J., Roth K.G., Wang W.L., Macedo M.P., Carapeto F.C.L., Haydu L.E., Siroy A.E., Vo P., Hong D.S., Eterovic A.K., Patel K.P., Bassett R.L., Grimm E.A., Lazar A.J., Woodman S.E.
Journal of Investigative Dermatology (Journal of Investigative Dermatology) 139 ( 3 ) 728 - 731 2019.03
Research paper (scientific journal), Joint Work, Accepted, ISSN 0022202X
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CD38-mediated immunosuppression as a mechanism of tumor cell escape from PD-1/PD-l1 blockade
Chen L., Diao L., Yang Y., Yi X., Rodriguez B.L., Li Y., Villalobos P.A., Cascone T., Liu X., Tan L., Lorenzi P.L., Huang A., Zhao Q., Peng D., Fradette J.J., Peng D.H., Ungewiss C., Roybal J., Tong P., Oba J., Skoulidis F., Peng W., Carter B.W., Gay C.M., Fan Y., Class C.A., Zhu J., Rodriguez-Canales J., Kawakami M., Byers L.A., Woodman S.E., Papadimitrakopoulou V.A., Dmitrovsky E., Wang J., Ullrich S.E., Wistuba I.I., Heymach J.V., Qin F.X.F., Gibbons D.L.
Cancer Discovery (Cancer Discovery) 8 ( 9 ) 1156 - 1175 2018.09
Research paper (scientific journal), Joint Work, Accepted, ISSN 21598274
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Targeting the HGF/MET Axis counters primary resistance to KIT inhibition in KIT-mutant melanoma
Oba J., Kim S.H., Wang W.L., Macedo M.P., Carapeto F., McKean M.A., Van Arnam J., Eterovic A.K., Sen S., Kale C.R., Yu X., Haymaker C.L., Routbort M., Haydu L.E., Bernatchez C., Lazar A.J., Grimm E.A., Hong D.S., Woodman S.E.
JCO Precision Oncology (JCO Precision Oncology) 2 1 - 8 2018
Research paper (scientific journal), Joint Work, Accepted
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Building a versatile medical test system in a pandemic
Oba J., Toriya M., Matsuo K.
Impact 2023 (2), 42-44 (Science Impact Ltd) ( 2 ) 42 - 44 2023.04
Joint Work, Lead author
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Integrative analysis identifies four molecular and clinical subsets in uveal melanoma
Robertson AG, Shih J, Yau C, Gibb EA, Oba J, Mungall KL, Hess JM, Uzunangelov V, Walter V, Danilova L, Lichtenberg TM, Kucherlapati M, Kimes PK, Tang M, Penson A, Babur O, Akbani R, Bristow CA, Hoadley KA, Iype L, Chang MT, Cherniack AD, Benz C, Mills GB, Verhaak RGW, Griewank KG, Felau I, Zenklusen JC, Gershenwald JE, Schoenfield L, Lazar AJ, Abdel-Rahman MH, Roman-Roman S, Stern MH, Cebulla CM, Williams MD, Jager MJ, Coupland SE, Esmaeli B, Kandoth C, Woodman SE.
Cancer Cell 32 ( 2 ) 204 - 220 2017.08
Research paper (scientific journal), Joint Work, Accepted, ISSN 1535-6108
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Prediction of oral food challenge outcome using machine learning methods
T Arima, T Hirose, J Oba, T Ishikawa, Y Ichigi, M Ono, M Gondo, K Sugita, ...
Journal of Allergy and Clinical Immunology 155 (2), AB258 2025
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Estimating copy number using next-generation sequencing to determine ERBB2 amplification status
K Nakamura, E Aimono, J Oba, H Hayashi, S Tanishima, T Hayashida, ...
Medical Oncology 38, 1-8 (Medical Oncology) 38 ( 4 ) 36 2021.04
Research paper (scientific journal), Accepted, ISSN 13570560
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Izawa M., Kosaka T., Nakamura K., Oba J., Hishida T., Hongo H., Mikami S., Nishihara H., Oya M.
IJU Case Reports (IJU Case Reports) 4 ( 1 ) 14 - 17 2021.01
Research paper (scientific journal), Accepted
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Defining ERBB2 amplification status by Next-Generation Sequencing
K Nakamura, E Aimono, J Oba, A Ueki, M Imai, E Yanagita, H Yamada, ...
CANCER SCIENCE 112, 320-320 2021
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The quality of DNA extracted from FFPE tissue is a critical factor for successful gene profiling test
E Yanagita, H Yamada, R Takamatsu, R Matsuoka, E Aimono, ...
CANCER SCIENCE 112, 324-324 2021
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The diagnostic value of genomic screening test for the cancer patients at the initial treatment phase
E Aimono, K Nakamura, E Yanagita, H Yamada, E Sasaki, H Hayashi, ...
CANCER SCIENCE 112, 521-521 2021
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Pulmonary metastasis secondary to abiraterone‐resistant prostate cancer with homozygous deletions of BRCA2: first Japanese case
M Izawa, T Kosaka, K Nakamura, J Oba, T Hishida, H Hongo, S Mikami, ...
IJU Case Reports 4 (1), 14-17 2021
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Multi-modal cancer cell-intrinsic molecular programs correlate with immunotherapy efficacy
J Oba
CANCER SCIENCE 112, 150-150 2021
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Ogata D., Roszik J., Oba J., Kim S.H., Bassett R.L., Haydu L.E., Tanese K., Grimm E.A., Ekmekcioglu S.
Cancers (Cancers) 12 ( 12 ) 1 - 13 2020.12
Research paper (scientific journal), Accepted
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Non-corticosteroid adherence and itch severity influence perception of itch in atopic dermatitis
Takeuchi S., Oba J., Esaki H., Furue M.
Journal of Dermatology (Journal of Dermatology) 45 ( 2 ) 158 - 164 2018.02
Research paper (scientific journal), Accepted, ISSN 03852407
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Oba, J., Esmaeli, B., Ellerhorst, J. A., Lyons, G. R., Milton, D. R., Wang, W. L., Macedo, M. P., Lazar, A. J., Grimm, E. A. and Chattopadhyay, C.
Melanoma Res 27 ( 2 ) 126 - 133 2017.04
Research paper (scientific journal), Joint Work, Accepted, ISSN 1473-5636
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Roszik, J., Haydu, L. E., Hess, K. R., Oba, J., Joon, A. Y., Siroy, A. E., Karpinets, T. V., Stingo, F. C., Baladandayuthapani, V., Tetzlaff, M. T., Wargo, J. A., Chen, K., Forget, M. A., Haymaker, C. L., Chen, J. Q., Meric-Bernstam, F., Eterovic, A. K., Shaw, K. R., Mills, G. B., Gershenwald, J. E., Radvanyi, L. G., Hwu, P., Futreal, P. A., Gibbons, D. L., Lazar, A. J., Bernatchez, C., Davies, M. A. and Woodman, S. E.
BMC Med 14 ( 1 ) 168 2016.10
Research paper (scientific journal), Joint Work, Accepted, ISSN 1741-7015
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Uveal melanoma: From diagnosis to treatment and the science in between
Chattopadhyay, C., Kim, D. W., Gombos, D. S., Oba, J., Qin, Y., Williams, M. D., Esmaeli, B., Grimm, E. A., Wargo, J. A., Woodman, S. E. and Patel, S. P.
Cancer 122 ( 15 ) 2299 - 312 2016.08
Research paper (scientific journal), Accepted, ISSN 1097-0142
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Oba, J., Wei, W., Gershenwald, J. E., Johnson, M. M., Wyatt, C. M., Ellerhorst, J. A. and Grimm, E. A.
Medicine (Baltimore) 95 ( 11 ) e3073 2016.03
Research paper (scientific journal), Accepted, ISSN 1536-5964
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Nakahara, T., Oba, J., Shimomura, C., Kido-Nakahara, M. and Furue, M.
J Invest Dermatol 136 ( 1 ) 146 - 53 2016.01
Research paper (scientific journal), Accepted, ISSN 1523-1747
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Oba, J., Nakahara, T., Hashimoto-Hachiya, A., Liu, M., Abe, T., Hagihara, A., Yokomizo, T. and Furue, M.
PLoS One 11 ( 2 ) e0149285 2016
Research paper (scientific journal), Accepted, ISSN 1932-6203
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Takeuchi, S., Oba, J., Esaki, H. and Furue, M.
Br J Dermatol 173 ( 1 ) 250 - 2 2015.07
Research paper (scientific journal), Accepted, ISSN 1365-2133
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Inflammatory IL-1beta-driven JNK activation in stage III melanoma
Qin, Y., Milton, D. R., Oba, J., Ding, Z., Lizee, G., Ekmekcioglu, S. and Grimm, E. A.
Pigment Cell Melanoma Res 28 ( 2 ) 236 - 9 2015.03
Research paper (scientific journal), Accepted, ISSN 1755-148X (Electronic)
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Oba, J., Nakahara, T., Abe, T., Hagihara, A., Moroi, Y. and Furue, M.
J Am Acad Dermatol 70 ( 5 ) 954 - 6 2014.05
Research paper (scientific journal), Accepted, ISSN 1097-6787
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Ito, T., Moroi, Y., Oba, J., Nakahara, T., Takeuchi, S., Uchi, H., Takahara, M., Masuda, T. and Furue, M.
Melanoma Res 22 ( 1 ) 38 - 44 2012.02
Research paper (scientific journal), Accepted, ISSN 1473-5636
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Expression of CD10 predicts tumor progression and unfavorable prognosis in malignant melanoma
Oba, J., Nakahara, T., Hayashida, S., Kido, M., Xie, L., Takahara, M., Uchi, H., Miyazaki, S., Abe, T., Hagihara, A., Moroi, Y. and Furue, M.
J Am Acad Dermatol 65 ( 6 ) 1152 - 60 2011.12
Research paper (scientific journal), Accepted, ISSN 1097-6787
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Clinicopathologic and prognostic significance of SATB1 in cutaneous malignant melanoma
Chen, H., Takahara, M., Oba, J., Xie, L., Chiba, T., Takeuchi, S., Tu, Y., Nakahara, T., Uchi, H., Moroi, Y. and Furue, M.
J Dermatol Sci 64 ( 1 ) 39 - 44 2011.10
Research paper (scientific journal), Accepted, ISSN 1873-569X (Electronic)
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Oba, J., Moroi, Y., Nakahara, T., Abe, T., Hagihara, A. and Furue, M.
Br J Dermatol 165 ( 3 ) 506 - 12 2011.09
Research paper (scientific journal), Accepted, ISSN 1365-2133
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Xie, L., Moroi, Y., Takahara, M., Tsuji, G., Oba, J., Hayashida, S., Takeuchi, S., Shan, B., Uchi, H. and Furue, M.
Eur J Dermatol 21 ( 4 ) 505 - 9 2011.07
Research paper (scientific journal), Accepted, ISSN 1167-1122
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Oba, J., Nakahara, T., Abe, T., Hagihara, A., Moroi, Y. and Furue, M.
J Dermatol Sci 62 ( 2 ) 116 - 23 2011.05
Research paper (scientific journal), Accepted, ISSN 1873-569X (Electronic)
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CD10-bearing fibroblasts may inhibit skin inflammation by down-modulating substance P
Xie, L., Takahara, M., Nakahara, T., Oba, J., Uchi, H., Takeuchi, S., Moroi, Y. and Furue, M.
Arch Dermatol Res 303 ( 1 ) 49 - 55 2011.01
Research paper (scientific journal), Accepted, ISSN 1432-069X (Electronic)
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Tashiro, A., Takeuchi, S., Nakahara, T., Oba, J., Tsujita, J., Fukushi, J., Kiryu, H., Oda, Y., Xie, L., Yan, X., Takahara, M., Moroi, Y. and Furue, M.
J Dermatol 37 ( 11 ) 995 - 7 2010.11
Research paper (scientific journal), Accepted, ISSN 1346-8138
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Hair follicle nevus - A dermoscopic approach
Okada, J., Moroi, Y., Tsujita, J., Takahara, M., Urabe, K., Kiryu, H. and Furue, M.
Eur J Dermatol 18 ( 2 ) 185 - 7 2008.03
Research paper (scientific journal), Accepted, ISSN 1167-1122
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Case of adult T-cell leukemia/lymphoma manifesting marked purpura
Okada, J., Imafuku, S., Tsujita, J., Moroi, Y., Urabe, K. and Furue, M.
J Dermatol 34 ( 11 ) 782 - 5 2007.11
Research paper (scientific journal), Accepted, ISSN 0385-2407